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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015795725.1_cds_XP_016445511.1_3962
CDS Infomation

[gene=LOC107770686] [db_xref=GeneID:107770686] [protein=eIF-2-alpha kinase GCN2-like] [protein_id=XP_016445511.1] [location=join(2500..2633,4068..4136,4220..4279,4387..4492,10119..10223,10455..10868,11545..11682,11967..12053,12188..12274,12378..12492,13573..13690,18718..18772,18876..19045,19275..19452)] [gbkey=CDS]
Sequence

ATGGGGCAAAGTTCAAAGAAGAAGAAGAGGAAGAGTGGTGGAGTAGGGCGGCGCAACAAG
TCATCCAAATCCAAAGATCACAATTCGATTGGTGACGGTAATTCTGAATTGCTTGCCGAA
GAGCTCACTGCATTGTGTGCCATATTTCAAGAAGATTGTGAAGTTGTTTCAGAGTCACCT
TCACAGCTTCATATCCAGCTCAGGCCATACTCAAAGGATGCTGGCTATGAAGATTCAGAT
GTGTCAGCTATTCTTTCAGTGAGGTGTTTGCCTGGGTATCCATACAAGACCCCAAAGCTT
CAGATAATACCAGAGAAAGGTTTATCCAAAGCTGACGCTAACAACCTTTTGTCTTTGCTT
TATGATCAGGCCAGCTCCAATGCTCGAGAAGGGCGTGTAATGATCTACAATTTGGTTGAA
GCTGCTCAAGAATTCTTGTCTGAAATTGTTCCACAGGAGCATTTGCATGGATCGGTTTCA
TGCCAGTCGACAGATATTACCAGCCAATTTACTTATAAGGATGCGACAGCTTCATCTGGC
GATACCTGTTCTTTTGGTGGACAATTTGTATATGGCTTTCTAGATCTTTTTAGTGGCTCA
GGTGAGTCGTGGCATTGGAGCCTGGGAATGAATGATACTGGTTGCATAGACTCTTTGGTG
CAGTCCCATGTATCAGAAGGTCTCACACATGAATATGACAATCAGCAAAAGAAAATTGAC
CAAATTGTGAAGCCAGCATTGAATGAAGCAGCAAAGCAAGACTCTTTGCGTAAGGCTGAA
ATGAAATTGGATGATCTTGAAGAAGAGAGTGTAGGCGAGAGTAAAAGTTGTAGTGATTTG
AGTAAAAGTTATACGGATGAATCAACTGAAGACCATGTCATGTGCAAGAATATTTTTTTG
GAAGGGAATATATCAGACAGCGGTGATGCTCAGCGGGAAACTGAACCTAAACCTTCAGAA
CTGGTGTCCTCTGGATCTCTGGTCCTGGACCATTTACCCCACACTCTAGAAAAAGACCTC
ATTCTGGCACACTTGCTTCGGCTTGCCTGCGGCGCTAAAGGACCGCTATCTGATGCTTTG
CCAGAAGTAACATCAGAGCTCTTTGACCTTGGGATTGTCTCCAAACGTGTACAAGATTTG
GCAAGCAAACCTTCTTCAATTTTTGATGGGACTTTTGATCGTGTTTTTCAAGCACATAAG
GTGTCATCAAAGCTCTCACAATTTTGGAAAGCTTCATCTGAATTTGAAGGGCAGAATTCT
TCACCTCCTCAAAACTCTCGTTATTTGAATGACTTTGAGGAGCTCCAACCCCTAGGTCAG
GGTGGGTTTGGTCACGTTGTGTTGTGCAAGAATAAGCTTGATGGGAGGCAATATGCAGTG
AAGAAGATTCGATTAAAGGACAAGAGTCTGCCTTTAAATGACCGTATATTGAGGGAAGTT
GCCACACTTTCGCGGTTGCAGCATCAGCATGTTGTTCGCTATTACCAGGCATGGTTTGAA
ACAGGCATCACTCTATCTTGCGATGATTCCAGCTGCGGTTCCAGAACTGTTGTGAGCTCT
AGTTTCACCTATGTGGATGGAAGTATGTCGGACCACCTTGGACAGGAGAATAAGCTCGAG
CTGACTTACCTATATATCCAAATGGAATACTGCCCAAGCCAATCATCCAGTACTCATTAT
CCTCCGCTGTGTCTCCTTTCTTCTAAACTAGATGGTGTTGCACTGTTGCTTGTCCTCCAT
TTGCAGGATTTAACATGTCTCCTGCCTTTTCTTATCCTTGCTCTGGGGTTCTTAATGTTT
CTTGAAGAAATCAAGCCACTTCCTCATTTTAGTTAA

Peptide Sequence

PEP ID

XP_016445511.1
PEP Infomation

PREDICTED: eIF-2-alpha kinase GCN2-like [Nicotiana tabacum]
Sequence

MGQSSKKKKRKSGGVGRRNKSSKSKDHNSIGDGNSELLAEELTALCAIFQEDCEVVSESP
SQLHIQLRPYSKDAGYEDSDVSAILSVRCLPGYPYKTPKLQIIPEKGLSKADANNLLSLL
YDQASSNAREGRVMIYNLVEAAQEFLSEIVPQEHLHGSVSCQSTDITSQFTYKDATASSG
DTCSFGGQFVYGFLDLFSGSGESWHWSLGMNDTGCIDSLVQSHVSEGLTHEYDNQQKKID
QIVKPALNEAAKQDSLRKAEMKLDDLEEESVGESKSCSDLSKSYTDESTEDHVMCKNIFL
EGNISDSGDAQRETEPKPSELVSSGSLVLDHLPHTLEKDLILAHLLRLACGAKGPLSDAL
PEVTSELFDLGIVSKRVQDLASKPSSIFDGTFDRVFQAHKVSSKLSQFWKASSEFEGQNS
SPPQNSRYLNDFEELQPLGQGGFGHVVLCKNKLDGRQYAVKKIRLKDKSLPLNDRILREV
ATLSRLQHQHVVRYYQAWFETGITLSCDDSSCGSRTVVSSSFTYVDGSMSDHLGQENKLE
LTYLYIQMEYCPSQSSSTHYPPLCLLSSKLDGVALLLVLHLQDLTCLLPFLILALGFLMF
LEEIKPLPHFS

Transcript Sequence

Gene sequence data has not been registered.